Publications
2026
Green, I.; Iyer, E. S.; Kang, A.; Uchida, N.; Watabe-Uchida, M.
Dopamine in the Ventral and Tail of Striatum Supports Global and Local Evaluation in Reward-Threat Conflict. bioRxiv 2026. https://doi.org/https://doi.org/10.64898/2026.05.01.722240.
Green, I.; Iyer, E. S.; Kang, A.; Uchida, N.; Watabe-Uchida, M.
Dopamine in the Ventral and Tail of Striatum Supports Global and Local Evaluation in Reward-Threat Conflict. bioRxiv 2026. https://doi.org/https://doi.org/10.64898/2026.05.01.722240.
Doi, Y.; Asaka, M.; Born, R.; Yanagihara, D.; Uchida, N.
A Novel Behavioral Paradigm Using Mice to Study Predictive Postural Control. Front Neurosci 2026, 20. https://doi.org/https://doi.org/10.3389/fnins.2026.1790603.
Doi, Y.; Asaka, M.; Born, R.; Yanagihara, D.; Uchida, N.
A Novel Behavioral Paradigm Using Mice to Study Predictive Postural Control. Front Neurosci 2026, 20. https://doi.org/https://doi.org/10.3389/fnins.2026.1790603.
Hakim, R.; Jaggi, A.; Heo, G.; Matsumoto, H.; Uchida, N.; Watabe-Uchida, M.; Datta, S. R.; Rusall, S.; Sabatini, B. L.
Spectral Envelopes of Facial Movements Predict Intention, Cortical Representations, and Neural Prosthetic Control. bioRxiv 2026. https://doi.org/https://doi.org/10.1101/2025.09.10.675423.
Hakim, R.; Jaggi, A.; Heo, G.; Matsumoto, H.; Uchida, N.; Watabe-Uchida, M.; Datta, S. R.; Rusall, S.; Sabatini, B. L.
Spectral Envelopes of Facial Movements Predict Intention, Cortical Representations, and Neural Prosthetic Control. bioRxiv 2026. https://doi.org/https://doi.org/10.1101/2025.09.10.675423.
Hennig, J. A.; Burrell, M.; Uchida, N.; Gershman, S. J.
Hennig, J. A.; Burrell, M.; Uchida, N.; Gershman, S. J.
Lee, J.; Hennig, J. A.; Frelih, V.; Gershman, S. J.; Uchida, N.
Lee, J.; Hennig, J. A.; Frelih, V.; Gershman, S. J.; Uchida, N.
2025
Kamath, T.; Lodder, B.; Bilsel, E.; Green, I.; Dalangin, R.; Raghubardayal, M.; Wang, W.; Capelli, P.; Legister, J.; Timmins, J.; Hulshof, L.; Wallace, J. B.; Tian, L.; Uchida, N.; Watabe-Uchida, M.; Sabatini, B. L.
Hunger Modulates Exploration through Suppression of Dopamine Signaling in the Tail of the Striatum. Neuron 2025, 113 (23), 4055-4068.
Kamath, T.; Lodder, B.; Bilsel, E.; Green, I.; Dalangin, R.; Raghubardayal, M.; Wang, W.; Capelli, P.; Legister, J.; Timmins, J.; Hulshof, L.; Wallace, J. B.; Tian, L.; Uchida, N.; Watabe-Uchida, M.; Sabatini, B. L.
Hunger Modulates Exploration through Suppression of Dopamine Signaling in the Tail of the Striatum. Neuron 2025, 113 (23), 4055-4068.
Kingsbury, L.; Zhang, G.; Sanguinetti-Scheck, J. I.; Uchida, N.
Kingsbury, L.; Zhang, G.; Sanguinetti-Scheck, J. I.; Uchida, N.
Bukwich, M.; Campbell, M. G.; Zoltowski, D.; Kingsbury, L.; Tomov, M. S.; Stern, J.; Kim, H. R.; Drugowitsch, J.; Linderman, S. W.; Uchida, N.
Competitive Integration of Time and Reward Explains Value-Sensitive Foraging Decisions and Frontal Cortex Ramping Dynamics. Neuron 2025, 113 (20), 3458-3475.
Bukwich, M.; Campbell, M. G.; Zoltowski, D.; Kingsbury, L.; Tomov, M. S.; Stern, J.; Kim, H. R.; Drugowitsch, J.; Linderman, S. W.; Uchida, N.
Competitive Integration of Time and Reward Explains Value-Sensitive Foraging Decisions and Frontal Cortex Ramping Dynamics. Neuron 2025, 113 (20), 3458-3475.
Campbell, M. G.; Ra, Y.; Chen, Z.; Xu, S.; Burrell, M.; Matias, S.; Watabe-Uchida, M.; Uchida, N.
A Hardwired Neural Circuit for Temporal Difference Learning. bioRxiv 2025.
Campbell, M. G.; Ra, Y.; Chen, Z.; Xu, S.; Burrell, M.; Matias, S.; Watabe-Uchida, M.; Uchida, N.
A Hardwired Neural Circuit for Temporal Difference Learning. bioRxiv 2025.
Romero-Pinto, S.; Uchida, N.
Tonic Dopamine and Biases in Value Learning Linked through a Biologically Inspired Reinforcement Learning Model. Nature Communications 2025, 16, 7529.
Romero-Pinto, S.; Uchida, N.
Tonic Dopamine and Biases in Value Learning Linked through a Biologically Inspired Reinforcement Learning Model. Nature Communications 2025, 16, 7529.
Masset, P.; Tano, P.; Kim, H. R.; Malik, A. N.; Pouget, A.; Uchida, N.
Multi-Timescale Reinforcement Learning in the Brain. Nature 2025, 642, 682-690.
Masset, P.; Tano, P.; Kim, H. R.; Malik, A. N.; Pouget, A.; Uchida, N.
Multi-Timescale Reinforcement Learning in the Brain. Nature 2025, 642, 682-690.
Tolooshams, B.; Matias, S.; Wu, H.; Temereanca, S.; Uchida, N.; Murthy, V. N.; Masset, P.; Ba, D.
Interpretable Deep Learning for Deconvolutional Analysis of Neural Signals. Neuron 2025, 113 (8), 1151-1168.
Tolooshams, B.; Matias, S.; Wu, H.; Temereanca, S.; Uchida, N.; Murthy, V. N.; Masset, P.; Ba, D.
Interpretable Deep Learning for Deconvolutional Analysis of Neural Signals. Neuron 2025, 113 (8), 1151-1168.
Qian, L.; Burrell, M.; Hennig, J. A.; Matias, S.; Murthy, V. N.; Gershman, S. J.; Uchida, N.
Prospective Contingency Explains Behavior and Dopamine Signals During Associative Learning. Nature Neuroscience 2025, 28, 1280–1292.
Qian, L.; Burrell, M.; Hennig, J. A.; Matias, S.; Murthy, V. N.; Gershman, S. J.; Uchida, N.
Prospective Contingency Explains Behavior and Dopamine Signals During Associative Learning. Nature Neuroscience 2025, 28, 1280–1292.
Tsutsui-Kimura, I.; Tian, Z. M.; Amo, R.; Zhuo, Y.; Li, Y.; Campbell, M. G.; Uchida, N.; Watabe-Uchida, M.
Dopamine in the Tail of the Striatum Facilitates Avoidance in Threat–reward Conflicts. Nature Neuroscience 2025, 28, 795-810.
Tsutsui-Kimura, I.; Tian, Z. M.; Amo, R.; Zhuo, Y.; Li, Y.; Campbell, M. G.; Uchida, N.; Watabe-Uchida, M.
Dopamine in the Tail of the Striatum Facilitates Avoidance in Threat–reward Conflicts. Nature Neuroscience 2025, 28, 795-810.
Liu, D.; Rahman, M.; Johnson, A.; Amo, R.; Tsutsui-Kimura, I.; Sullivan, Z. A.; Pena, N.; Talay, M.; Logeman, B. L.; Finkbeiner, S.; Qian, L.; Choi, S.; Capo-Battaglia, A.; Abdus-Saboor, I.; Ginty, D. D.; Uchida, N.; Watabe-Uchida, M.; Dulac, C.
A Hypothalamic Circuit Underlying the Dynamic Control of Social Homeostasis. Nature 2025, 640, 1000-1010.
Liu, D.; Rahman, M.; Johnson, A.; Amo, R.; Tsutsui-Kimura, I.; Sullivan, Z. A.; Pena, N.; Talay, M.; Logeman, B. L.; Finkbeiner, S.; Qian, L.; Choi, S.; Capo-Battaglia, A.; Abdus-Saboor, I.; Ginty, D. D.; Uchida, N.; Watabe-Uchida, M.; Dulac, C.
A Hypothalamic Circuit Underlying the Dynamic Control of Social Homeostasis. Nature 2025, 640, 1000-1010.
Lowet, A. S.; Zheng, Q.; Meng, M.; Matias, S.; Drugowitsch, J.; Uchida, N.
An Opponent Striatal Circuit for Distributional Reinforcement Learning. Nature 2025, 639, 717-726.
Lowet, A. S.; Zheng, Q.; Meng, M.; Matias, S.; Drugowitsch, J.; Uchida, N.
An Opponent Striatal Circuit for Distributional Reinforcement Learning. Nature 2025, 639, 717-726.
Campbell, M. G.; Green, I.; Pinto, S. R.; Uchida, N.
Impacts of Dopamine on Learning and Behavior in Health and Disease: Insights from Optogenetics in Rodents. In Encyclopedia of the Human Brain; Elsevier, 2025; Vol. 3, pp. 355-386.
Campbell, M. G.; Green, I.; Pinto, S. R.; Uchida, N.
Impacts of Dopamine on Learning and Behavior in Health and Disease: Insights from Optogenetics in Rodents. In Encyclopedia of the Human Brain; Elsevier, 2025; Vol. 3, pp. 355-386.
Uchida, N.; Watabe-Uchida, M.; Green, I.
Chapter 19. Diversity of Encoding: Reward to Aversion. In The Handbook of Dopamine; Elsevier, 2025; Vol. 32, pp. 237-249.
Uchida, N.; Watabe-Uchida, M.; Green, I.
Chapter 19. Diversity of Encoding: Reward to Aversion. In The Handbook of Dopamine; Elsevier, 2025; Vol. 32, pp. 237-249.
Watabe-Uchida, M.; Amo, R.
Chapter 5. Dopamine Neuron Connectomes: Inputs and Outputs. In The Handbook of Dopamine; Elsevier, 2025; Vol. 32, pp. 49-62.
Watabe-Uchida, M.; Amo, R.
Chapter 5. Dopamine Neuron Connectomes: Inputs and Outputs. In The Handbook of Dopamine; Elsevier, 2025; Vol. 32, pp. 49-62.
2024
Gershman, S. J.; Assad, J.; Datta, S. R.; Linderman, S.; Sabatini, B. L.; Uchida, N.; Wilbrecht, L.
Explaining Dopamine through Prediction Errors and Beyond. Nature Neuroscience 2024, 27, 1645-1655.
Gershman, S. J.; Assad, J.; Datta, S. R.; Linderman, S.; Sabatini, B. L.; Uchida, N.; Wilbrecht, L.
Explaining Dopamine through Prediction Errors and Beyond. Nature Neuroscience 2024, 27, 1645-1655.
Cai, X.; Liu, C.; Tsutsui-Kimura, I.; Lee, J.-H.; Guo, C.; Banarjee, A.; Lee, J.; Amo, R.; Xie, Y.; Patriarchi, T.; Li, Y.; Watabe-Uchida, M.; Uchida, N.; Kaeser, P. S.
Cai, X.; Liu, C.; Tsutsui-Kimura, I.; Lee, J.-H.; Guo, C.; Banarjee, A.; Lee, J.; Amo, R.; Xie, Y.; Patriarchi, T.; Li, Y.; Watabe-Uchida, M.; Uchida, N.; Kaeser, P. S.
Lowet, A. S.; Uchida, N.
Predictive Coding: A Distinction - Without a Difference. Curr. Biol. 2024, 34 (20), R926-R929.
Lowet, A. S.; Uchida, N.
Predictive Coding: A Distinction - Without a Difference. Curr. Biol. 2024, 34 (20), R926-R929.
Amo, R.; Uchida, N.; Watabe-Uchida, M.
Glutamate Inputs Send Prediction Error of Reward But Not Negative Value of Aversive Stimuli to Dopamine Neurons. Neuron 2024, 112 (6), 1001-1019.
Amo, R.; Uchida, N.; Watabe-Uchida, M.
Glutamate Inputs Send Prediction Error of Reward But Not Negative Value of Aversive Stimuli to Dopamine Neurons. Neuron 2024, 112 (6), 1001-1019.
2023
Hennig, J.; Pinto, S. R.; Yamaguchi, T.; Linderman, S.; Uchida, N.; Gershman, S. J.
Emergence of Belief-Like Representations through Reinforcement Learning. PLoS Comput Biol. 2023, 19 (9), e1011067.
Hennig, J.; Pinto, S. R.; Yamaguchi, T.; Linderman, S.; Uchida, N.; Gershman, S. J.
Emergence of Belief-Like Representations through Reinforcement Learning. PLoS Comput Biol. 2023, 19 (9), e1011067.
Markowitz, J. E.; Gillis, W.; Jay, M.; Wood, J.; Harris, R.; Cieszkowski, R.; Scott, R.; Brann, D.; Koveal, D.; Kula, T.; Weinreb, C.; Osman, M. A. M.; Pinto, S. R.; Uchida, N.; Linderman, S.; Sabatini, B. L.; Datta, S. R.
Spontaneous Behaviour Is Structured by Reinforcement Without Explicit Reward. Nature 2023, 617 (7946), 108-117.
Markowitz, J. E.; Gillis, W.; Jay, M.; Wood, J.; Harris, R.; Cieszkowski, R.; Scott, R.; Brann, D.; Koveal, D.; Kula, T.; Weinreb, C.; Osman, M. A. M.; Pinto, S. R.; Uchida, N.; Linderman, S.; Sabatini, B. L.; Datta, S. R.
Spontaneous Behaviour Is Structured by Reinforcement Without Explicit Reward. Nature 2023, 617 (7946), 108-117.
2022
Amo, R.; Matias, S.; Yamanaka, A.; Tanaka, K. F.; Uchida, N.; Watabe-Uchida, M.
A Gradual Temporal Shift of Dopamine Responses Mirrors the Progression of Temporal Difference Error in Machine Learning. Nature Neuroscience 2022, 25, 1082-1092.
Amo, R.; Matias, S.; Yamanaka, A.; Tanaka, K. F.; Uchida, N.; Watabe-Uchida, M.
A Gradual Temporal Shift of Dopamine Responses Mirrors the Progression of Temporal Difference Error in Machine Learning. Nature Neuroscience 2022, 25, 1082-1092.
Mikhael, J. G.; Kim, H. R.; Uchida, N.; Gershman, S. J.
The Role of State Uncertainty in the Dynamics of Dopamine. Curr Biol 2022, 32 (5), 1077-1087.
Mikhael, J. G.; Kim, H. R.; Uchida, N.; Gershman, S. J.
The Role of State Uncertainty in the Dynamics of Dopamine. Curr Biol 2022, 32 (5), 1077-1087.
Akiti, K.; Tsutsui-Kimura, I.; Xie, Y.; Mathis, A.; Markowitz, J. E.; Anyoha, R.; Datta, S. R.; Mathis, M. W.; Uchida, N.; Watabe-Uchida, M.
Striatal Dopamine Explains Novelty-Induced Behavioral Dynamics and Individual Variability in Threat Prediction. Neuron 2022, 110 (22), 3789-3804.
Akiti, K.; Tsutsui-Kimura, I.; Xie, Y.; Mathis, A.; Markowitz, J. E.; Anyoha, R.; Datta, S. R.; Mathis, M. W.; Uchida, N.; Watabe-Uchida, M.
Striatal Dopamine Explains Novelty-Induced Behavioral Dynamics and Individual Variability in Threat Prediction. Neuron 2022, 110 (22), 3789-3804.
2021
Starkweather, C. K.; Uchida, N.
Dopamine Signals As Temporal Difference Errors: Recent Advances. Curr Opin Neurobiol 2021, 67, 95-105.
Starkweather, C. K.; Uchida, N.
Dopamine Signals As Temporal Difference Errors: Recent Advances. Curr Opin Neurobiol 2021, 67, 95-105.
2020
Lak, A.; Hueske, E.; Hirokawa, J.; Masset, P.; Ott, T.; Urai, A. E.; Donner, T.; Carandini, M.; Tonegawa, S.; Uchida, N.; Kepecs, A.
Lak, A.; Hueske, E.; Hirokawa, J.; Masset, P.; Ott, T.; Urai, A. E.; Donner, T.; Carandini, M.; Tonegawa, S.; Uchida, N.; Kepecs, A.
Lowet, A. S.; Zheng, Q.; Matias, S.; Drugowitsch, J.; Uchida, N.
Distributional Reinforcement Learning in the Brain. Trends Neurosci. 2020, 43, 980-997.
Lowet, A. S.; Zheng, Q.; Matias, S.; Drugowitsch, J.; Uchida, N.
Distributional Reinforcement Learning in the Brain. Trends Neurosci. 2020, 43, 980-997.
Tsutsui-Kimura, I.; Matsumoto, H.; Akiti, K.; Yamada, M. M.; Uchida, N.; Watabe-Uchida, M.
Tsutsui-Kimura, I.; Matsumoto, H.; Akiti, K.; Yamada, M. M.; Uchida, N.; Watabe-Uchida, M.
Starkweather, C. K.; Uchida, N.
Dopamine Reward Prediction Errors: The Interplay Between Experiments and Theory. In The Cognitive Neuroscience; MIT Press, 2020.
Starkweather, C. K.; Uchida, N.
Dopamine Reward Prediction Errors: The Interplay Between Experiments and Theory. In The Cognitive Neuroscience; MIT Press, 2020.
Kim, H. R.; Malik, A. N.; Bech, P.; Tsutsui-Kimura, I.; Sun, F.; Zhang, Y.; Li, Y.; Watabe-Uchida, M.; Gershman, S. J.; Uchida, N.
A Unified Framework for Dopamine Signals across Timescales. Cell 2020, 183 (6), 1600-1616.
Kim, H. R.; Malik, A. N.; Bech, P.; Tsutsui-Kimura, I.; Sun, F.; Zhang, Y.; Li, Y.; Watabe-Uchida, M.; Gershman, S. J.; Uchida, N.
A Unified Framework for Dopamine Signals across Timescales. Cell 2020, 183 (6), 1600-1616.
Dabney, W.; Kurth-Nelson, Z.; Uchida, N.; Starkweather, C. K.; Hassabis, D.; Munos, R.; Botvinick, M.
A Distributional Code for Value in Dopamine-Based Reinforcement Learning. Nature 2020, 577 (7792), 671-675.
Dabney, W.; Kurth-Nelson, Z.; Uchida, N.; Starkweather, C. K.; Hassabis, D.; Munos, R.; Botvinick, M.
A Distributional Code for Value in Dopamine-Based Reinforcement Learning. Nature 2020, 577 (7792), 671-675.
2019
Uchida, N.; Gershman, S. J.
Believing in Dopamine. Nat Rev Neurosci. 2019, 20 (11), 703-714.
Uchida, N.; Gershman, S. J.
Believing in Dopamine. Nat Rev Neurosci. 2019, 20 (11), 703-714.
2018
Menegas, W.; Akiti, K.; Amo, R.; Uchida, N.; Watabe-Uchida, M.
Dopamine Neurons Projecting to the Posterior Striatum Reinforce Avoidance of Threatening Stimuli. Nature Neuroscience 2018, 21 (10), 1421–1430.
Menegas, W.; Akiti, K.; Amo, R.; Uchida, N.; Watabe-Uchida, M.
Dopamine Neurons Projecting to the Posterior Striatum Reinforce Avoidance of Threatening Stimuli. Nature Neuroscience 2018, 21 (10), 1421–1430.
Babayan, B. M.; Uchida, N.; Gershman, S. J.
Belief State Representation in the Dopamine System. Nature Communications 2018, 9 (1), 1891.
Babayan, B. M.; Uchida, N.; Gershman, S. J.
Belief State Representation in the Dopamine System. Nature Communications 2018, 9 (1), 1891.
Tye, K.; Uchida, N.
Editorial Overview: Neurobiology of Behavior. Current Opinion in Neurobiology 2018, 49 (April 2018), iv-ix.
Tye, K.; Uchida, N.
Editorial Overview: Neurobiology of Behavior. Current Opinion in Neurobiology 2018, 49 (April 2018), iv-ix.
Watabe-Uchida, M.; Uchida, N.
Multiple Dopamine Systems: Weal and Woe of Dopamine. Cold Spring Harb Symp Quant Biol 2018, 83, 83-95.
Watabe-Uchida, M.; Uchida, N.
Multiple Dopamine Systems: Weal and Woe of Dopamine. Cold Spring Harb Symp Quant Biol 2018, 83, 83-95.